Basic Information
Locus ID:
AsparagusV1_Unassigned.194.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Receptor like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Un88 | 22485 | 23015 | + | AsparagusV1_Unassigned.194.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 19,547.78 Da | 57.18 | 70.45 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 84 | 131 | 8.44E-7 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 79 | 155 | 6.1E-9 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32800.1 | protein kinase family protein. | 0 |
| RefSeq | XP_020249760.1 | LOW QUALITY PROTEIN: receptor like protein kinase S.2 [Asparagus officinalis] | 0 |
| O48837 | Receptor like protein kinase S.2 OS=Arabidopsis thaliana OX=3702 GN=LECRKS2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1R3L7E4 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_UnF1940 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g150080 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_Unassigned.194.V1.1 |
| Casuarinaceae | Casuarina equisetifolia | 5 | Ceq08G2045, Ceq08G2058, Ceq08G2065, Ceq08G2070, Ceq08G2072 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g00100 |
| Poaceae | Echinochloa crus-galli | 1 | CH01.3184 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g00970 |