Basic Information
Locus ID:
AsparagusV1_Unassigned.1121.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Short Name:
PPCK2
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Un842 | 39978 | 40799 | + | AsparagusV1_Unassigned.1121.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 29,811.85 Da | 34.35 | 92.49 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 8 | 265 | 1.34188E-103 | - |
| Pfam | PF00069 | Protein kinase domain | 10 | 266 | 1.4E-60 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 269 | 1.35E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 94 | 2.4E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 95 | 273 | 5.3E-61 | - |
| SMART | SM00220 | serkin_6 | 9 | 266 | 4.0E-77 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 3 | 263 | 3.8E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 9 | 266 | 44.6684 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 129 | 141 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 15 | 38 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04012 (ErbB signaling pathway)
map04012 (ErbB signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04024 (cAMP signaling pathway)
map04024 (cAMP signaling pathway)
ko04066 (HIF-1 signaling pathway)
map04066 (HIF-1 signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
map04217 (Necroptosis)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04745 (Phototransduction - fly)
map04745 (Phototransduction - fly)
ko04750 (Inflammatory mediator regulation of TRP channels)
map04750 (Inflammatory mediator regulation of TRP channels)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08650.1 | phosphoenolpyruvate carboxylase kinase 1. Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light. | 0 |
| RefSeq | XP_020250829.1 | phosphoenolpyruvate carboxylase kinase 1-like [Asparagus officinalis] | 0 |
| Q9SPK4 | Phosphoenolpyruvate carboxylase kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PPCK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1R3L5B1 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_UnF11210 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology