Basic Information
Locus ID:
AsparagusV1_Unassigned.1054.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Un766 | 16646 | 18182 | + | AsparagusV1_Unassigned.1054.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 28,526.99 Da | 33.16 | 86.64 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 174 | 240 | 4.8E-10 | IPR001245 |
| Pfam | PF01453 | D-mannose binding lectin | 47 | 130 | 2.1E-9 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 43 | 129 | 4.32E-15 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 177 | 252 | 5.27E-17 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 171 | 253 | 3.6E-19 | - |
| Gene3D | G3DSA:2.90.10.30 | - | 32 | 157 | 3.8E-10 | - |
| SMART | SM00108 | blect_4 | 1 | 119 | 0.003 | IPR001480 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 1 | 117 | 12.632485 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 151 | 253 | 9.078988 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 0 |
| RefSeq | XP_020250768.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Asparagus officinalis] | 0 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1R3L5F9 | Bulb-type lectin domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_UnF10540 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_Unassigned.1054.V1.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr06G001370 |