halophFGD

Basic Information

Locus ID: AsparagusV1_Unassigned.1051.V1.1

Species & Taxonomic ID: Asparagus officinalis & 4686

Genome Assembly: GCA_001876935.1

Description: F-box kelch-repeat protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Un757	18569	20219	+	AsparagusV1_Unassigned.1051.V1.1

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.56	44,504.67 Da	57.19	77.58	-0.26

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	21	56	4.2E-10	IPR001810
SUPERFAMILY	SSF81383	F-box domain	16	56	5.49E-9	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	21	58	1.4E-8	-
SMART	SM00256	fbox_2	25	65	7.0E-4	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G56470.1	F-box family protein.
RefSeq	XP_020250759.1	F-box/kelch-repeat protein At1g57790-like isoform X1 [Asparagus officinalis]
Swiss-Prot	Q9LXZ3	F-box protein At3g56470 OS=Arabidopsis thaliana OX=3702 GN=At3g56470 PE=2 SV=1
TrEMBL	A0A1R3L5F6	F-box domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_UnF10510 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Asparagaceae	Asparagus officinalis	3	AsparagusV1_03.3142.V1.1, AsparagusV1_10.1839.V1.1 ... AsparagusV1_Unassigned.1051.V1.1
Poaceae	Echinochloa crus-galli	10	AH03.1805, AH03.1806, AH03.1809, BH03.1944, BH05.3340 ... CH03.2086, CH03.2153, CH03.2155, CH05.3444, CH08.378
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_6AG0533730, gene-QOZ80_6AG0534220 ... gene-QOZ80_6AG0534240, gene-QOZ80_6AG0534260, gene-QOZ80_6BG0486790, gene-QOZ80_6BG0487280
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.3HG0243010.1.CDS1 ... HORVU.MOREX.r3.5HG0478310.1.CDS1, HORVU.MOREX.r3.5HG0522130.1, HORVU.MOREX.r3.7HG0724440.1.CDS1
Poaceae	Lolium multiflorum	7	gene-QYE76_004864, gene-QYE76_004865, gene-QYE76_004866 ... gene-QYE76_004867, gene-QYE76_004951, gene-QYE76_014074, gene-QYE76_020698
Poaceae	Oryza coarctata	3	Oco17G004050, Oco18G003980, Oco18G004020
Poaceae	Oryza sativa	13	LOC_Os02g17180.1, LOC_Os02g38499.1, LOC_Os02g38589.1 ... LOC_Os02g38720.1, LOC_Os04g56250.1, LOC_Os09g17080.1, LOC_Os09g21580.1, LOC_Os09g21620.1, LOC_Os09g21700.1, LOC_Os09g21790.1, LOC_Os09g22420.1, LOC_Os09g22460.1, LOC_Os09g22520.1
Poaceae	Paspalum vaginatum	2	gene-BS78_02G172800, gene-BS78_02G173600
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0200764, Pt_Chr0202521, Pt_Chr0504528, Pt_Chr0504530
Poaceae	Thinopyrum elongatum	3	Tel5E01G003100, Tel5E01G336100, Tel6E01G504100
Poaceae	Triticum dicoccoides	1	gene_TRIDC5BG000530
Poaceae	Triticum aestivum	14	TraesCS3A02G310000.1, TraesCS5A02G062200.1.cds1 ... TraesCS5A02G201100.1, TraesCS5B02G000500.1, TraesCS5B02G199700.1.cds1, TraesCS5B02G199800.1.cds1, TraesCS5D02G000800.1, TraesCS5D02G206800.1.cds1, TraesCS5D02G207000.1.cds1, TraesCS5D02G207300.1.cds1, TraesCS6A02G275900.1, TraesCS6B02G303200.1.cds1, TraesCS7A02G401600.1.cds1, TraesCS7B02G301700.1.cds1