halophFGD

Basic Information

Locus ID: AsparagusV1_10.358.V1.1

Species & Taxonomic ID: Asparagus officinalis & 4686

Genome Assembly: GCA_001876935.1

Description: Belongs to the UPP synthase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	5725609	5725971	+	AsparagusV1_10.358.V1.1

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.81	13,788.89 Da	32.65	95.00	-0.16

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF01255	Putative undecaprenyl diphosphate synthase	2	110	1.2E-33	IPR001441
SUPERFAMILY	SSF64005	Undecaprenyl diphosphate synthase	2	108	2.62E-31	IPR036424
Gene3D	G3DSA:3.40.1180.10	-	1	108	2.0E-36	IPR036424
ProSitePatterns	PS01066	Undecaprenyl pyrophosphate synthase family signature.	60	77	-	IPR018520

Gene Ontology

Molecular Function:

GO:0016765 (transferase activity, transferring alkyl or aryl (other than methyl) groups)

KEGG Pathway

KO Term:

K11778 (ditrans,polycis-polyprenyl diphosphate synthase [EC:2.5.1.87])

Pathway:

ko00900 (Terpenoid backbone biosynthesis) map00900 (Terpenoid backbone biosynthesis) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)

Reaction:

R05556 (trans,trans-Farnesyl diphosphate + n Isopentenyl diphosphate <=> ditrans,polycis-Polyprenyl diphosphate + n Diphosphate)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G17570.1	Undecaprenyl pyrophosphate synthetase family protein.
RefSeq	XP_020260997.1	dehydrodolichyl diphosphate synthase 6-like [Asparagus officinalis]
Swiss-Prot	K7WCI9	Dehydrodolichyl diphosphate synthase CPT3 OS=Solanum lycopersicum OX=4081 GN=CPT3 PE=1 SV=1
TrEMBL	A0A5P1E4U4	Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C10F3580 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg19928, jg30930, jg30931, jg7050
Aizoaceae	Mesembryanthemum crystallinum	4	gene_13369, gene_13370, gene_13491, gene_4083
Amaranthaceae	Atriplex hortensis	2	Ah000200, Ah028584
Amaranthaceae	Beta vulgaris	1	BVRB_5g121040
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg24997, Sbi_jg26784, Sbi_jg31448, Sbi_jg33782 ... Sbi_jg57825, Sbi_jg8851
Amaranthaceae	Salicornia europaea	3	Seu_jg19751, Seu_jg25470, Seu_jg8475
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00011714, GOSA_00019558
Amaranthaceae	Suaeda glauca	6	Sgl53157, Sgl54413, Sgl58427, Sgl59742, Sgl73641, Sgl77104
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000004155, gene:ENSEOMG00000008873 ... gene:ENSEOMG00000022196, gene:ENSEOMG00000025037, gene:ENSEOMG00000036118, gene:ENSEOMG00000040099
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.5AG0026250, CQ.Regalona.r1.5BG0027800 ... CQ.Regalona.r1.7AG0007830, CQ.Regalona.r1.9AG0022380, CQ.Regalona.r1.9BG0008190
Anacardiaceae	Pistacia vera	1	pistato.v30058840
Apiaceae	Apium graveolens	4	Ag2G01333, Ag3G00162, Ag3G00163, Ag6G00968
Arecaceae	Cocos nucifera	2	COCNU_01G003370, COCNU_10G007510
Arecaceae	Phoenix dactylifera	4	gene-LOC103697150, gene-LOC103711167, gene-LOC103720169 ... gene-LOC120107091
Asparagaceae	Asparagus officinalis	7	AsparagusV1_01.2654.V1.1, AsparagusV1_02.730.V1.1 ... AsparagusV1_04.1382.V1.1, AsparagusV1_05.2810.V1.1, AsparagusV1_09.346.V1.1, AsparagusV1_10.358.V1.1, AsparagusV1_Unassigned.577.V1.1
Asteraceae	Flaveria trinervia	4	Ftri17G19691, Ftri18G06108, Ftri6G14049, Ftri9G31236
Brassicaceae	Arabidopsis thaliana	3	AT2G17570.1, AT5G60500.1, AT5G60510.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10014376m.g.v1.0, Thhalv10023082m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp4g09720.v2.2, Sp6g22080.v2.2
Brassicaceae	Brassica nigra	3	BniB02g013910.2N, BniB02g040240.2N, BniB03g065620.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G1560, Ceq06G0065, Ceq06G0066
Casuarinaceae	Casuarina glauca	3	Cgl02G1628, Cgl06G0072, Cgl06G0073
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno01g00400
Dunaliellaceae	Dunaliella salina	1	Dusal.0623s00003.v1.0
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate02g04320, gene.Thate06g18350, gene.Thate07g05850
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-9722
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG02.2870, evm.TU.LG09.935
Plantaginaceae	Plantago ovata	1	Pov_00022417
Poaceae	Echinochloa crus-galli	6	AH05.3562, BH05.1238, BH06.508, CH01.2737, CH05.1465 ... CH05.3747
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_6AG0509930, gene-QOZ80_6BG0462260
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.7HG0656150.1
Poaceae	Lolium multiflorum	2	gene-QYE76_005574, gene-QYE76_028398
Poaceae	Oryza coarctata	2	Oco11G003190, Oco12G003160
Poaceae	Oryza sativa	2	LOC_Os06g07120.1, LOC_Os07g41680.1
Poaceae	Paspalum vaginatum	2	gene-BS78_03G358700, gene-BS78_10G056800
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0701900
Poaceae	Sporobolus alterniflorus	3	Chr04G010560, Chr07G001370, Chr11G022050
Poaceae	Thinopyrum elongatum	1	Tel7E01G258200
Poaceae	Triticum dicoccoides	2	gene_TRIDC7AG015220, gene_TRIDC7BG004560
Poaceae	Triticum aestivum	4	TraesCS7A02G130000.1, TraesCS7B02G030000.2 ... TraesCS7D02G129100.1, TraesCSU02G255100.1
Poaceae	Zea mays	2	Zm00001eb375240_P001, Zm00001eb375270_P001
Poaceae	Zoysia japonica	2	nbis-gene-34809, nbis-gene-5090
Poaceae	Zoysia macrostachya	2	Zma_g29170, Zma_g31419
Portulacaceae	Portulaca oleracea	6	evm.TU.LG02.1189, evm.TU.LG04.1606, evm.TU.LG09.783 ... evm.TU.LG10.1296, evm.TU.LG16.1481, evm.TU.LG26.184
Posidoniaceae	Posidonia oceanica	1	gene.Posoc03g00630
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_3_RagTag.35, evm.TU.Scaffold_6_RagTag.2188
Rhizophoraceae	Carallia pectinifolia	6	nbisL1-mrna-119, nbisL1-mrna-120, nbisL1-mrna-121 ... nbisL1-mrna-168, nbisL1-mrna-169, nbisL1-mrna-16950
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-15401
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-5843
Rhizophoraceae	Kandelia candel	2	add.evm.TU.utg000011l.554, add.evm.TU.utg000019l.503
Rhizophoraceae	Kandelia obovata	1	Maker00006824
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-23071, nbisL1-mrna-6603
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-2485, nbisL1-mrna-2930
Salicaceae	Populus euphratica	4	populus_peu14019, populus_peu14021, populus_peu23225 ... populus_peu32845
Solanaceae	Lycium barbarum	4	gene-LOC132621784, gene-LOC132622694, gene-LOC132628036 ... gene-LOC132631168
Solanaceae	Solanum chilense	1	SOLCI002843300
Solanaceae	Solanum pennellii	1	gene-LOC107012648
Tamaricaceae	Reaumuria soongarica	2	STRG.28401_chr04_-, gene_11306
Tamaricaceae	Tamarix chinensis	1	TC07G2386
Zosteraceae	Zostera marina	2	Zosma03g11240.v3.1, Zosma06g30470.v3.1