Basic Information
Locus ID:
AsparagusV1_10.1940.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 72929312 | 72942175 | + | AsparagusV1_10.1940.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 63,350.86 Da | 47.90 | 70.55 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 117 | 482 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 122 | 418 | 7.1E-63 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 437 | 481 | 6.0E-6 | IPR017892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 93 | 472 | 5.26E-87 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 117 | 447 | 3.2E-108 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 203 | 436 | 3.2E-108 | - |
| SMART | SM00133 | pkinase_C_6 | 419 | 483 | 1.6E-5 | IPR000961 |
| SMART | SM00220 | serkin_6 | 119 | 418 | 3.8E-103 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 119 | 418 | 46.845036 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 419 | 491 | 14.400799 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 238 | 250 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 125 | 148 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 507 | 531 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 511 | 525 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 82 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 86 | - | - |
| Coils | Coil | Coil | 61 | 81 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03920.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_020247808.1 | serine/threonine-protein kinase tricorner-like [Asparagus officinalis] | 0 |
| A2VDV2 | Serine/threonine-protein kinase 38 OS=Bos taurus OX=9913 GN=STK38 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1E403 | Serine/threonine-protein kinase tricorner-like OS=Asparagus officinalis OX=4686 GN=A4U43_C10F19400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology