Basic Information
Locus ID:
AsparagusV1_10.157.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Major Facilitator Superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 2221727 | 2239237 | - | AsparagusV1_10.157.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 55,927.93 Da | 30.68 | 102.46 | 0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 83 | 494 | 1.17463E-51 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 83 | 456 | 2.4E-24 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 80 | 501 | 5.75E-38 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 80 | 500 | 1.1E-36 | IPR036259 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 380 | 401 | 4.1E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 440 | 463 | 4.1E-5 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 129 | 145 | 4.1E-5 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_020261673.1 | hippocampus abundant transcript-like protein 1 isoform X2 [Asparagus officinalis] | 0 |
| Q8CIA9 | Hippocampus abundant transcript-like protein 1 OS=Mus musculus OX=10090 GN=Mfsd14b PE=2 SV=3 | 0 | |
| TrEMBL | A0A5P1E486 | MFS domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C10F1570 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology