Basic Information
Locus ID:
AsparagusV1_10.1371.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 57942840 | 57948853 | - | AsparagusV1_10.1371.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.79 | 57,939.71 Da | 43.89 | 83.32 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 420 | 481 | 1.09176E-18 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 67 | 300 | 1.05739E-118 | - |
| Pfam | PF13499 | EF-hand domain pair | 349 | 407 | 1.7E-10 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 64 | 301 | 6.4E-59 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 419 | 481 | 5.3E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 325 | 488 | 4.52E-42 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 63 | 311 | 4.45E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 101 | 302 | 1.6E-80 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 308 | 484 | 1.1E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 65 | 139 | 1.6E-80 | - |
| SMART | SM00054 | efh_1 | 420 | 448 | 2.7E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 348 | 376 | 0.0085 | IPR002048 |
| SMART | SM00054 | efh_1 | 456 | 484 | 3.4E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 59 | 301 | 2.1E-75 | IPR000719 |
| SMART | SM00054 | efh_1 | 384 | 412 | 0.046 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 344 | 379 | 14.206556 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 380 | 415 | 9.966455 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 452 | 487 | 13.620752 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 416 | 451 | 14.150764 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 59 | 301 | 39.071335 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 465 | 477 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 393 | 405 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 179 | 191 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 357 | 369 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 429 | 441 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_020248201.1 | calcium-dependent protein kinase 29-like [Asparagus officinalis] | 0 |
| Q2QVG8 | Calcium-dependent protein kinase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1E768 | Calcium-dependent protein kinase 24 OS=Asparagus officinalis OX=4686 GN=A4U43_C10F13710 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology