Basic Information
Locus ID:
AsparagusV1_09.834.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 25427822 | 25438140 | - | AsparagusV1_09.834.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 98,417.90 Da | 40.71 | 89.23 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 592 | 864 | 4.1459E-89 | - |
| Pfam | PF13855 | Leucine rich repeat | 95 | 152 | 3.4E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 333 | 369 | 5.0E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 587 | 859 | 1.2E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 67 | 5.5E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 331 | 456 | 1.63E-18 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 305 | 3.06E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 568 | 861 | 8.52E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 664 | 885 | 6.3E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 327 | 1.3E-72 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 553 | 663 | 1.6E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 330 | 458 | 3.0E-29 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 140 | 165 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 115 | 7.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 189 | 212 | 90.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 262 | 285 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 139 | 8.7E-4 | IPR003591 |
| SMART | SM00220 | serkin_6 | 586 | 865 | 4.9E-40 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 396 | 420 | 110.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 586 | 865 | 40.541271 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 711 | 723 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 592 | 613 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 463 | 487 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 487 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020246871.1 | receptor-like kinase TMK4 [Asparagus officinalis] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1E660 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C09F8340 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology