Basic Information
Locus ID:
AsparagusV1_09.534.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ATP, which is converted to ADP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 11408441 | 11418298 | + | AsparagusV1_09.534.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 43,129.62 Da | 38.55 | 90.31 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07970 | Endoplasmic reticulum vesicle transporter | 296 | 381 | 2.0E-19 | IPR012936 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 130 | 173 | 7.45E-6 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 117 | 6.21E-15 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 130 | 176 | 4.7E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 127 | 6.1E-17 | - |
| SMART | SM00220 | serkin_6 | 8 | 158 | 2.7E-5 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22200.2 | Endoplasmic reticulum vesicle transporter protein. | 0 |
| RefSeq | XP_020245074.1 | serine/threonine-protein kinase OXI1-like [Asparagus officinalis] | 0 |
| Q9LSF1 | Serine/threonine-protein kinase OXI1 OS=Arabidopsis thaliana OX=3702 GN=OXI1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1E7A5 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C09F5340 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | COCNU_01G016110 |
| Asparagaceae | Asparagus officinalis | 6 | AsparagusV1_05.1942.V1.1, AsparagusV1_05.680.V1.1 ... |
| Brassicaceae | Brassica nigra | 1 | BniB01g044620.2N |
| Poaceae | Sporobolus alterniflorus | 1 | Chr20G008700 |