Basic Information
Locus ID:
AsparagusV1_09.480.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 9894151 | 9898105 | + | AsparagusV1_09.480.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 48,034.43 Da | 28.77 | 91.28 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 1 | 206 | 5.85697E-118 | - |
| CDD | cd00051 | EFh | 329 | 388 | 1.54209E-20 | IPR002048 |
| Pfam | PF13833 | EF-hand domain pair | 267 | 317 | 6.7E-5 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 6 | 207 | 1.5E-62 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 326 | 388 | 2.5E-15 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 239 | 4.86E-70 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 231 | 395 | 1.56E-43 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 215 | 389 | 1.3E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 35 | 214 | 8.6E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 34 | 1.3E-10 | - |
| SMART | SM00054 | efh_1 | 326 | 354 | 0.0041 | IPR002048 |
| SMART | SM00054 | efh_1 | 362 | 390 | 1.2E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 290 | 318 | 3.7 | IPR002048 |
| SMART | SM00054 | efh_1 | 254 | 282 | 0.0052 | IPR002048 |
| SMART | SM00220 | serkin_6 | 1 | 207 | 2.9E-65 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 207 | 42.421093 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 250 | 285 | 14.457615 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 358 | 393 | 14.597092 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 322 | 357 | 13.899706 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 286 | 321 | 8.962221 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 263 | 275 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 335 | 347 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 371 | 383 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 299 | 311 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 69 | 81 | - | IPR008271 |
| Coils | Coil | Coil | 341 | 361 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_020246401.1 | calcium-dependent protein kinase 29-like isoform X1 [Asparagus officinalis] | 0 |
| Q2QVG8 | Calcium-dependent protein kinase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1E8P8 | Calcium-dependent protein kinase OS=Asparagus officinalis OX=4686 GN=A4U43_C09F4800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology