Basic Information
Locus ID:
AsparagusV1_09.428.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 7831806 | 7832462 | - | AsparagusV1_09.428.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.69 | 24,514.53 Da | 83.27 | 62.29 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF117281 | Kelch motif | 59 | 186 | 5.89E-8 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 35 | 216 | 1.9E-8 | IPR015915 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 87 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 90 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_020245022.1 | LOW QUALITY PROTEIN: F-box/kelch-repeat protein SKIP20-like [Asparagus officinalis] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5P1EA19 | Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C09F4280 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology