Basic Information
Locus ID:
AsparagusV1_09.232.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
receptor-like serine threonine-protein kinase At5g57670
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 3060257 | 3064680 | - | AsparagusV1_09.232.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.52 | 76,501.06 Da | 49.47 | 87.36 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 335 | 600 | 2.4E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 315 | 610 | 2.97E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 295 | 408 | 2.4E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 409 | 630 | 5.6E-57 | - |
| SMART | SM00220 | serkin_6 | 334 | 613 | 6.9E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 334 | 613 | 36.880566 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 456 | 468 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 340 | 362 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 193 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 284 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77280.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_020245982.1 | receptor protein kinase TMK1 [Asparagus officinalis] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1E7Z8 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C09F2320 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology