Basic Information
Locus ID:
AsparagusV1_09.1682.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Type I inositol-1,4,5-trisphosphate 5-phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 68328077 | 68358227 | - | AsparagusV1_09.1682.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.06 | 130,428.87 Da | 50.35 | 79.67 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 447 | 787 | 7.08567E-102 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 452 | 778 | 2.6E-13 | IPR005135 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 80 | 426 | 3.48E-21 | IPR036322 |
| SUPERFAMILY | SSF56219 | DNase I-like | 424 | 807 | 2.4E-61 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 429 | 817 | 3.4E-100 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 69 | 428 | 8.7E-17 | IPR015943 |
| SMART | SM00320 | WD40_4 | 343 | 380 | 52.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 67 | 108 | 23.0 | IPR001680 |
| SMART | SM00128 | i5p_5 | 445 | 793 | 2.2E-87 | IPR000300 |
| SMART | SM00320 | WD40_4 | 303 | 341 | 46.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 125 | 163 | 0.7 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1110 | 1125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1110 | 1130 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_020245468.1 | type I inositol polyphosphate 5-phosphatase 12-like [Asparagus officinalis] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5P1EBA7 | IPPc domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C09F16820 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology