Basic Information
Locus ID:
AsparagusV1_09.1627.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
NAC domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 67345821 | 67358900 | + | AsparagusV1_09.1627.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 44,097.07 Da | 42.41 | 76.12 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 58 | 197 | 8.2E-20 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 42 | 216 | 3.66E-36 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 66 | 221 | 2.9E-28 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 57 | 216 | 29.571005 | IPR003441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_020246883.1 | SUPPRESSOR OF GAMMA RESPONSE 1-like [Asparagus officinalis] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1E849 | NAC domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C09F16270 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology