Basic Information
Locus ID:
AsparagusV1_09.146.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 1908300 | 1929460 | - | AsparagusV1_09.146.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 128,710.95 Da | 40.57 | 91.32 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 247 | 489 | 3.13395E-125 | - |
| CDD | cd13983 | STKc_WNK | 522 | 781 | 1.11505E-165 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 241 | 489 | 1.5E-70 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 528 | 781 | 1.3E-53 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 527 | 832 | 1.75E-69 | IPR011009 |
| SUPERFAMILY | SSF55021 | ACT-like | 138 | 207 | 9.99E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 235 | 497 | 7.19E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 509 | 605 | 1.7E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 230 | 318 | 6.1E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 607 | 788 | 2.7E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 319 | 505 | 7.5E-60 | - |
| SMART | SM00220 | serkin_6 | 241 | 493 | 2.6E-64 | IPR000719 |
| SMART | SM00220 | serkin_6 | 524 | 781 | 7.0E-62 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 241 | 493 | 43.269135 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 141 | 215 | 13.866655 | IPR002912 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 524 | 781 | 42.68964 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 648 | 660 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 358 | 370 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 398 | 408 | 1.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 460 | 482 | 1.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 417 | 439 | 1.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 352 | 370 | 1.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 315 | 328 | 1.4E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18750.1 | with no lysine (K) kinase 6. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. | 0 |
| RefSeq | XP_020245961.1 | probable serine/threonine-protein kinase WNK7 [Asparagus officinalis] | 0 |
| Q8S8Y8 | Probable serine/threonine-protein kinase WNK6 OS=Arabidopsis thaliana OX=3702 GN=WNK6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1E4E3 | Non-specific serine/threonine protein kinase OS=Asparagus officinalis OX=4686 GN=A4U43_C09F1460 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg23072 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22877 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah024374 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g011310 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg38909, Sbi_jg54217 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg10793 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00023740 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl10161, Sgl15313, Sgl15363 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000013155, gene:ENSEOMG00000035227 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0014280, CQ.Regalona.r1.1BG0011760 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30038040 |
| Apiaceae | Apium graveolens | 2 | Ag3G01125, AgUnG00309 |
| Arecaceae | Cocos nucifera | 1 | COCNU_15G001460 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103701194, gene-LOC103704336 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_09.146.V1.1, AsparagusV1_10.1676.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri16G28737 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G1959 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G2106 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno08g08170 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate01g28500, gene.Thate09g01810 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-12253 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.724 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00023006 |
| Poaceae | Echinochloa crus-galli | 10 | AH04.310, AH05.269, AH08.25, BH01.1418, BH04.361, BH05.313 ... |
| Poaceae | Eleusine coracana subsp. coracana | 8 | gene-QOZ80_4AG0298610, gene-QOZ80_4BG0329310 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0214820.1, HORVU.MOREX.r3.5HG0458010.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_002961, gene-QYE76_011103, gene-QYE76_033664 ... |
| Poaceae | Oryza coarctata | 5 | Oco07G019840, Oco21G001770, Oco22G002620, Oco23G002350 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os04g59000.1, LOC_Os08g01270.1, LOC_Os12g06670.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_05G061300, gene-BS78_06G292200 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0402733, Pt_Chr0703280 |
| Poaceae | Sporobolus alterniflorus | 10 | Chr04G022680, Chr06G024460, Chr16G009920, Chr17G008950 ... |
| Poaceae | Thinopyrum elongatum | 3 | Tel2E01G996100, Tel5E01G227700, Tel7E01G560200 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC2AG080090, gene_TRIDC2AG080130 ... |
| Poaceae | Triticum aestivum | 12 | TraesCS2A02G577000.1, TraesCS2A02G577200.1 ... |
| Poaceae | Zea mays | 5 | Zm00001eb139460_P002, Zm00001eb198810_P002 ... |
| Poaceae | Zoysia japonica | 4 | nbis-gene-25577, nbis-gene-41377, nbis-gene-46322 ... |
| Poaceae | Zoysia macrostachya | 4 | Zma_g22278, Zma_g23478, Zma_g24779, Zma_g25522 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG04.1378, evm.TU.LG05.1902 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g01280, gene.Posoc05g21050 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_7_RagTag.1215 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-18618 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-1086 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-13191 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000002l.368 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00011605 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8934 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-18419 |
| Salicaceae | Populus euphratica | 2 | populus_peu14863, populus_peu32538 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132627294 |
| Solanaceae | Solanum chilense | 1 | SOLCI003896200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107018048 |
| Tamaricaceae | Tamarix chinensis | 1 | TC03G2855 |
| Zosteraceae | Zostera marina | 2 | Zosma02g01600.v3.1, Zosma04g23940.v3.1 |