Basic Information
Locus ID:
AsparagusV1_09.1420.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
mitogen-activated protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 60731009 | 60732346 | + | AsparagusV1_09.1420.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 30,493.57 Da | 38.38 | 91.83 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00719 | Inorganic pyrophosphatase | 52 | 112 | 2.2E-22 | IPR008162 |
| Pfam | PF00069 | Protein kinase domain | 137 | 259 | 9.6E-22 | IPR000719 |
| SUPERFAMILY | SSF50324 | Inorganic pyrophosphatase | 27 | 112 | 2.22E-32 | IPR036649 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 132 | 259 | 3.42E-27 | IPR011009 |
| Gene3D | G3DSA:3.90.80.10 | Inorganic pyrophosphatase | 30 | 120 | 2.0E-36 | IPR036649 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 223 | 259 | 7.4E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 134 | 222 | 7.4E-43 | - |
| SMART | SM00220 | serkin_6 | 137 | 262 | 0.0023 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 137 | 263 | 18.011677 | IPR000719 |
| ProSitePatterns | PS00387 | Inorganic pyrophosphatase signature. | 98 | 104 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18040.5 | - | 0 |
| RefSeq | XP_020247083.1 | mitogen-activated protein kinase 9-like isoform X3 [Asparagus officinalis] | 0 |
| Q9LV37 | Mitogen-activated protein kinase 9 OS=Arabidopsis thaliana OX=3702 GN=MPK9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5P1E7J7 | inorganic diphosphatase OS=Asparagus officinalis OX=4686 GN=A4U43_C09F14200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 7 | AsparagusV1_02.1391.V1.1, AsparagusV1_04.2346.V1.1 ... |
| Brassicaceae | Brassica nigra | 1 | BniB07g010910.2N |
| Poaceae | Zea mays | 1 | Zm00001eb025520_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-13596, nbis-gene-24744, nbis-gene-40726 |