Basic Information
Locus ID:
AsparagusV1_09.1083.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 42002239 | 42005930 | + | AsparagusV1_09.1083.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 49,845.53 Da | 50.45 | 84.00 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14134 | PKc_CLK | 87 | 427 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 100 | 427 | 3.1E-50 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 87 | 430 | 2.02E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 154 | 427 | 6.8E-113 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 87 | 180 | 6.8E-113 | - |
| SMART | SM00220 | serkin_6 | 100 | 427 | 4.8E-77 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 100 | 427 | 38.619049 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 221 | 233 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 78 | - | - |
| Coils | Coil | Coil | 431 | 433 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24740.1 | FUS3-complementing gene 2. a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins. | 0 |
| RefSeq | XP_020245738.1 | serine/threonine-protein kinase AFC2 isoform X1 [Asparagus officinalis] | 0 |
| P51567 | Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana OX=3702 GN=AFC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1E6X6 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C09F10830 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology