Basic Information
Locus ID:
AsparagusV1_08.7.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
SH3 domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 107182 | 143842 | + | AsparagusV1_08.7.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 41,379.35 Da | 35.77 | 80.16 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07607 | BAR_SH3P_plant | 48 | 257 | 5.97429E-120 | - |
| Pfam | PF14604 | Variant SH3 domain | 309 | 357 | 5.8E-8 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 269 | 359 | 1.14E-14 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 47 | 258 | 4.19E-25 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 45 | 268 | 8.7E-12 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 296 | 368 | 1.0E-13 | - |
| SMART | SM00326 | SH3_2 | 305 | 360 | 2.4E-10 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 302 | 361 | 18.068914 | IPR001452 |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 149 | 176 | - | - |
| Coils | Coil | Coil | 186 | 213 | - | - |
| Coils | Coil | Coil | 244 | 264 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_020277352.1 | SH3 domain-containing protein 2 [Asparagus officinalis] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A834ZXL0 | SH3 domain-containing protein OS=Tetracentron sinense OX=13715 GN=HHK36_003042 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology