Basic Information
Locus ID:
AsparagusV1_08.643.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 12517105 | 12521510 | + | AsparagusV1_08.643.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.80 | 58,365.36 Da | 49.60 | 85.88 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 79 | 486 | 8.1E-178 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 89 | 466 | 9.11E-151 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 84 | 485 | 1.1E-177 | IPR011989 |
| PIRSF | PIRSF028043 | PP2A_B56 | 3 | 510 | 1.1E-225 | IPR002554 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 33 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25510.1 | Protein phosphatase 2A regulatory B subunit family protein. | 0 |
| RefSeq | XP_020241689.1 | serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform [Asparagus officinalis] | 0 |
| Q6I621 | Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform OS=Oryza sativa subsp. japonica OX=39947 GN=B'KAPPA PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9QQN8 | Serine/threonine protein phosphatase 2A regulatory subunit OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105039096 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology