Basic Information
Locus ID:
AsparagusV1_08.639.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Short Name:
CTR1
Description:
Serine threonine-protein kinase CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 12403888 | 12419086 | - | AsparagusV1_08.639.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 64,251.08 Da | 45.32 | 86.74 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 40 | 245 | 3.0E-75 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 436 | 576 | 1.1E-35 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 414 | 576 | 1.5E-44 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 428 | 513 | 3.8E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 514 | 579 | 1.6E-17 | - |
| SMART | SM00220 | serkin_6 | 435 | 579 | 1.6E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 435 | 579 | 29.898369 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 441 | 462 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 556 | 568 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_020242240.1 | serine/threonine-protein kinase CTR1 isoform X1 [Asparagus officinalis] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8N4ETP2 | serine/threonine-protein kinase CTR1 isoform X1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105034770 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology