Basic Information
Locus ID:
AsparagusV1_08.571.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 10296172 | 10315907 | - | AsparagusV1_08.571.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.41 | 83,537.01 Da | 34.05 | 78.85 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 140 | 417 | 5.69554E-95 | - |
| CDD | cd03407 | SPFH_like_u4 | 482 | 750 | 6.20833E-172 | - |
| Pfam | PF01145 | SPFH domain / Band 7 family | 481 | 654 | 1.3E-28 | IPR001107 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 138 | 414 | 7.7E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 120 | 436 | 1.91E-80 | IPR011009 |
| SUPERFAMILY | SSF117892 | Band 7/SPFH domain | 514 | 643 | 2.09E-24 | IPR036013 |
| Gene3D | G3DSA:3.30.479.30 | Band 7 domain | 509 | 639 | 7.1E-20 | IPR036013 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 114 | 219 | 3.0E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 220 | 437 | 8.6E-64 | - |
| SMART | SM00244 | PHB_4 | 477 | 637 | 2.2E-32 | IPR001107 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 134 | 418 | 39.297478 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 140 | 172 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 263 | 275 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 462 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| Coils | Coil | Coil | 590 | 610 | - | - |
| Coils | Coil | Coil | 629 | 662 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G15080.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020276981.1 | probable serine/threonine-protein kinase PIX7 [Asparagus officinalis] | 0 |
| Q9LFP7 | Serine/threonine-protein kinase PBL34 OS=Arabidopsis thaliana OX=3702 GN=PBL34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N5H9B2 | Receptor-like protein kinase OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_016256 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology