halophFGD

Basic Information

Locus ID: AsparagusV1_08.550.V1.1

Species & Taxonomic ID: Asparagus officinalis & 4686

Genome Assembly: GCA_001876935.1

Description: CDPK-related kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8	9915919	9916636	-	AsparagusV1_08.550.V1.1

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.09	6,074.01 Da	9.81	99.41	-0.09

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF47473	EF-hand	8	50	7.94E-6	IPR011992
ProSiteProfiles	PS50222	EF-hand calcium-binding domain profile.	24	51	9.659605	IPR002048

Gene Ontology

Molecular Function:

GO:0005509 (calcium ion binding)

KEGG Pathway

KO Term:

K13412 (calcium-dependent protein kinase [EC:2.7.11.1])

Pathway:

ko04626 (Plant-pathogen interaction) map04626 (Plant-pathogen interaction)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G46700.2	CDPK-related kinase 3.
RefSeq	XP_020240687.1	LOW QUALITY PROTEIN: CDPK-related kinase 3-like [Asparagus officinalis]
Swiss-Prot	Q9ZUZ2	CDPK-related kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRK3 PE=1 SV=1
TrEMBL	A0A5P1FNI6	Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F11270 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Chenopodium album	1	gene:ENSEOMG00000032068
Anacardiaceae	Pistacia vera	1	pistato.v30165530
Arecaceae	Cocos nucifera	4	COCNU_01G016240, COCNU_10G004470, COCNU_16G000340 ... contig69182461G000010
Asparagaceae	Asparagus officinalis	2	AsparagusV1_02.1961.V1.1, AsparagusV1_08.550.V1.1
Asteraceae	Flaveria trinervia	1	Ftri8G26530
Cymodoceaceae	Cymodocea nodosa	1	gene.Cymno15g03480
Poaceae	Hordeum vulgare	2	HORVU.MOREX.r3.1HG0084940.1, HORVU.MOREX.r3.3HG0283610.1
Poaceae	Zea mays	3	Zm00001eb093950_P001, Zm00001eb145760_P001 ... Zm00001eb170980_P002
Poaceae	Zoysia japonica	2	nbis-gene-34372, nbis-gene-45412
Portulacaceae	Portulaca oleracea	1	evm.TU.LG02.1200
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-799
Zosteraceae	Zostera marina	2	Zosma02g23970.v3.1, Zosma05g30300.v3.1