Basic Information
Locus ID:
AsparagusV1_08.3401.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 127273017 | 127278317 | + | AsparagusV1_08.3401.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 72,658.38 Da | 58.31 | 97.66 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 69 | 4.4E-10 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 395 | 621 | 7.1E-22 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 354 | 641 | 1.97E-37 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 177 | 4.16E-30 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 337 | 442 | 3.6E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 443 | 632 | 3.8E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 218 | 1.6E-42 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 360 | 627 | 17.983408 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 221 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 245 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_020241117.1 | inactive receptor-like serine/threonine-protein kinase At2g40270 [Asparagus officinalis] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FFC4 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C02F2850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology