Basic Information
Locus ID:
AsparagusV1_08.3377.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Short Name:
RAPTOR1
Description:
Regulatory-associated protein of
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 126801230 | 126820411 | + | AsparagusV1_08.3377.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 136,879.23 Da | 44.37 | 88.67 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14538 | Raptor N-terminal CASPase like domain | 101 | 252 | 3.2E-69 | IPR029347 |
| Pfam | PF00400 | WD domain, G-beta repeat | 962 | 1001 | 0.16 | IPR001680 |
| SUPERFAMILY | SSF48371 | ARM repeat | 434 | 757 | 1.52E-13 | IPR016024 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 930 | 1236 | 4.5E-36 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 836 | 1012 | 6.3E-7 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 1014 | 1243 | 6.7E-26 | IPR015943 |
| Gene3D | G3DSA:1.25.10.10 | - | 470 | 638 | 3.4E-7 | IPR011989 |
| SMART | SM01302 | Raptor_N_2 | 100 | 253 | 1.1E-98 | IPR029347 |
| SMART | SM00320 | WD40_4 | 1058 | 1098 | 7.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1016 | 1054 | 270.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1199 | 1237 | 16.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1102 | 1146 | 260.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 957 | 1001 | 0.61 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1150 | 1189 | 0.03 | IPR001680 |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 361 | 385 | 1.7E-162 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 437 | 467 | 1.7E-162 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 491 | 510 | 1.7E-162 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 190 | 215 | 1.7E-162 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 143 | 162 | 1.7E-162 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 164 | 185 | 1.7E-162 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 468 | 489 | 1.7E-162 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 326 | 353 | 1.7E-162 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 288 | 308 | 1.7E-162 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 99 | 120 | 1.7E-162 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 515 | 531 | 1.7E-162 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 217 | 241 | 1.7E-162 | - |
| PRINTS | PR01547 | Saccharomyces cerevisiae 175.8kDa hypothetical protein signature | 1082 | 1100 | 1.7E-162 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 662 | 698 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 668 | 698 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04136 (Autophagy - other)
map04136 (Autophagy - other)
ko04138 (Autophagy - yeast)
map04138 (Autophagy - yeast)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G08850.1 | HEAT repeat ;WD domain, G-beta repeat protein protein. Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive. | 0 |
| RefSeq | XP_020242343.1 | regulatory-associated protein of TOR 2 isoform X1 [Asparagus officinalis] | 0 |
| Q0IQN5 | Regulatory-associated protein of TOR 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RAPTOR2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5P1FJH9 | Raptor_N domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C02F2990 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg14720, jg3198 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_14560 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah031418 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_7g157690, BVRB_7g157970 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg2242, Sbi_jg34265 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg2513 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005961 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl71025, Sgl74616 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000035490, gene:ENSEOMG00000039698 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.7AG0022190, CQ.Regalona.r1.7AG0022780 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30268250 |
| Apiaceae | Apium graveolens | 2 | Ag10G00972, Ag5G02810 |
| Arecaceae | Cocos nucifera | 2 | COCNU_04G004100, COCNU_12G006510 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103708869, gene-LOC103714392 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_02.299.V1.1, AsparagusV1_07.1072.V1.1 ... |
| Asteraceae | Flaveria trinervia | 2 | Ftri10G16525, Ftri9G05039 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT3G08850.1, AT5G01770.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10012449m.g.v1.0, Thhalv10019904m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp3g07250.v2.2, Sp6g41030.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB01g054320.2N, BniB01g055740.2N, BniB07g024560.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0928 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0946 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g14630 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0279s00012.v1.0, Dusal.0279s00013.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate06g03290 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-11969, nbisL1-mrna-4303 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.915 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00006958 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G09603 |
| Poaceae | Echinochloa crus-galli | 8 | AH04.53, AH05.58, BH04.60, CH02.2102, CH02.2472, CH04.161 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0378880, gene-QOZ80_5BG0426010 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0464830.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_003616 |
| Poaceae | Oryza coarctata | 2 | Oco22G000290, Ocoptg000061lG000460 |
| Poaceae | Oryza sativa | 2 | LOC_Os11g01872.1, LOC_Os12g01922.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G009700, gene-BS78_08G003000 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0101003, Pt_Chr0702866, Pt_Chr0702885 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr07G022300, Chr17G007270, Chr19G011540, Chr27G004520 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G259600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG025000, gene_TRIDC5BG026250 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G149200.2, TraesCS5B02G147900.4 ... |
| Poaceae | Zea mays | 3 | Zm00001eb093980_P001, Zm00001eb195140_P002 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-40095, nbis-gene-57149 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g17510, Zma_g24612, Zma_g25443 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG03.2126, evm.TU.LG07.915, evm.TU.LG14.418 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g33950, gene.Posoc01g33960 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1891 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-5656 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-1336, nbisL1-mrna-1337 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-3638, nbisL1-mrna-3639 |
| Rhizophoraceae | Kandelia candel | 3 | evm.TU.utg000016l.744, evm.TU.utg000016l.745 ... |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017315 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-4909 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-13825 |
| Salicaceae | Populus euphratica | 3 | populus_peu11492, populus_peu25305, populus_peu25329 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132606757, gene-LOC132631363 |
| Solanaceae | Solanum chilense | 2 | SOLCI004127600, SOLCI004935400 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107001588, gene-LOC107031079 |
| Tamaricaceae | Reaumuria soongarica | 2 | gene_5716, gene_7476 |
| Tamaricaceae | Tamarix chinensis | 2 | TC02G2387, TC07G1044 |
| Zosteraceae | Zostera marina | 1 | Zosma01g19160.v3.1 |