Basic Information
Locus ID:
AsparagusV1_08.3358.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 126161383 | 126171425 | - | AsparagusV1_08.3358.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.96 | 43,187.43 Da | 64.61 | 58.05 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 94 | 201 | 1.0E-9 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 94 | 205 | 7.83E-22 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 62 | 253 | 5.1E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 201 | 9.89876 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 395 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71530.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020241337.1 | probable serine/threonine-protein kinase At1g54610 [Asparagus officinalis] | 0 |
| F4I114 | Probable serine/threonine-protein kinase At1g09600 OS=Arabidopsis thaliana OX=3702 GN=At1g09600 PE=3 SV=1 | 0 | |
| TrEMBL | A0A6I9S212 | probable serine/threonine-protein kinase At1g54610 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105052816 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg16965, jg39448 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.3358.V1.1 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000002l.341 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00011983 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-20313 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-18468 |