Basic Information
Locus ID:
AsparagusV1_08.2985.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 115774774 | 115779374 | - | AsparagusV1_08.2985.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.71 | 22,428.29 Da | 32.63 | 84.12 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 73 | 138 | 1.0E-8 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 45 | 142 | 2.11E-17 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 30 | 140 | 4.9E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 69 | 204 | 9.559545 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 75 | 98 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48210.4 | - | 0 |
| RefSeq | XP_020276873.1 | pto-interacting protein 1-like [Asparagus officinalis] | 0 |
| Q41328 | Pto-interacting protein 1 OS=Solanum lycopersicum OX=4081 GN=PTI1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1R3L674 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_UnF7520 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_08.2985.V1.1, AsparagusV1_08.2986.V1.1 |
| Brassicaceae | Brassica nigra | 1 | BniB08g035540.2N |
| Poaceae | Zoysia japonica | 1 | nbis-gene-50151 |
| Tamaricaceae | Tamarix chinensis | 4 | TC02G1743, TC05G0361, TC05G0510, TC12G1251 |