Basic Information
Locus ID:
AsparagusV1_08.2956.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 115080568 | 115086877 | - | AsparagusV1_08.2956.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.91 | 45,164.55 Da | 42.71 | 99.38 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 95 | 280 | 4.0E-36 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 73 | 351 | 1.62E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 61 | 166 | 3.5E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 167 | 364 | 1.4E-44 | - |
| SMART | SM00220 | serkin_6 | 91 | 326 | 3.9E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 91 | 352 | 29.757029 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 97 | 119 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 213 | 225 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 406 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020242564.1 | putative serine/threonine-protein kinase isoform X2 [Asparagus officinalis] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1ELQ0 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C06F230 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology