Basic Information
Locus ID:
AsparagusV1_08.2938.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 114273826 | 114275358 | - | AsparagusV1_08.2938.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 17,176.37 Da | 36.67 | 79.75 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF19026 | HYPK UBA domain | 119 | 158 | 3.5E-13 | IPR044034 |
| Pfam | PF01849 | NAC domain | 21 | 76 | 4.8E-23 | IPR002715 |
| Gene3D | G3DSA:1.10.8.10 | - | 120 | 157 | 2.0E-20 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 27 | 80 | 5.0E-32 | IPR038187 |
| SMART | SM01407 | NAC_2 | 21 | 77 | 1.7E-26 | IPR002715 |
| PIRSF | PIRSF015901 | NAC_alpha | 5 | 159 | 1.1E-61 | IPR016641 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 18 | 83 | 17.778694 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 118 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_020241973.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Asparagus officinalis] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J4ZNN6 | NAC-A/B domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_013524 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology