Basic Information
Locus ID:
AsparagusV1_08.2708.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Short Name:
CAX2
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 106867414 | 106878996 | - | AsparagusV1_08.2708.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 47,143.79 Da | 37.28 | 116.67 | 0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 280 | 419 | 2.2E-21 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 90 | 245 | 4.0E-20 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 267 | 423 | 3.2E-19 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 119 | 255 | 2.6E-15 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 57 | 422 | 2.4E-122 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 71 | 422 | 5.3E-106 | IPR004798 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_020241059.1 | vacuolar cation/proton exchanger 3-like isoform X2 [Asparagus officinalis] | 0 |
| Q6K1C4 | Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B7CU12 | Vacuolar cation/proton exchanger OS=Phoenix dactylifera OX=42345 GN=LOC103719208 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology