Basic Information
Locus ID:
AsparagusV1_08.2581.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 101152532 | 101161275 | - | AsparagusV1_08.2581.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 78,908.97 Da | 52.45 | 75.12 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 426 | 673 | 3.88568E-121 | - |
| CDD | cd00130 | PAS | 70 | 171 | 7.05288E-14 | IPR000014 |
| Pfam | PF00989 | PAS fold | 62 | 169 | 5.1E-13 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 421 | 672 | 2.3E-62 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 55 | 171 | 6.28E-21 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 399 | 671 | 9.61E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 413 | 497 | 1.2E-29 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 71 | 175 | 3.8E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 498 | 704 | 1.1E-57 | - |
| SMART | SM00091 | pas_2 | 61 | 128 | 8.1E-10 | IPR000014 |
| SMART | SM00220 | serkin_6 | 420 | 674 | 3.3E-42 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 59 | 171 | 2.5E-14 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 420 | 681 | 39.820438 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 59 | 130 | 18.312042 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 539 | 551 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 581 | 591 | 4.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 533 | 551 | 4.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 494 | 507 | 4.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 644 | 666 | 4.0E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 600 | 622 | 4.0E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 378 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 378 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 344 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_020240831.1 | probable serine/threonine-protein kinase DDB_G0272254 [Asparagus officinalis] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1FKY0 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C02F21970 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology