Basic Information
Locus ID:
AsparagusV1_08.2513.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 97977663 | 97984595 | + | AsparagusV1_08.2513.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 89,863.40 Da | 49.65 | 88.64 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 532 | 665 | 5.00815E-24 | - |
| Pfam | PF17862 | AAA+ lid domain | 688 | 729 | 2.0E-11 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 534 | 664 | 3.2E-37 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 494 | 730 | 1.56E-57 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 666 | 770 | 6.6E-95 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 493 | 775 | 6.6E-95 | IPR027417 |
| SMART | SM00382 | AAA_5 | 530 | 668 | 5.6E-19 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 637 | 656 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 201 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 731 | 754 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_020240998.1 | uncharacterized protein LOC109819630 isoform X1 [Asparagus officinalis] | 0 |
| Q7ZZ25 | Outer mitochondrial transmembrane helix translocase OS=Danio rerio OX=7955 GN=atad1a PE=2 SV=2 | 0 | |
| TrEMBL | A0A6I9REN7 | peroxisome biosynthesis protein PAS1 isoform X1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105047526 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology