Basic Information
Locus ID:
AsparagusV1_08.2464.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Inactive leucine-rich repeat receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 96024728 | 96053454 | + | AsparagusV1_08.2464.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.59 | 21,744.99 Da | 43.66 | 98.00 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 14 | 98 | 8.95E-12 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 85 | 1.2E-14 | - |
| Gene3D | G3DSA:3.40.50.1820 | alpha/beta hydrolase | 101 | 170 | 2.2E-5 | IPR029058 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 10 | 190 | 11.396964 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60630.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020242504.1 | LOW QUALITY PROTEIN: inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630 [Asparagus officinalis] | 0 |
| Q84MA9 | Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630 OS=Arabidopsis thaliana OX=3702 GN=At1g60630 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1FNA4 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C01F10150 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.2464.V1.1 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0102916 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-20145 |
| Zosteraceae | Zostera marina | 1 | Zosma03g31910.v3.1 |