Basic Information
Locus ID:
AsparagusV1_08.2265.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Endoplasmic reticulum vesicle transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 86446379 | 86448930 | + | AsparagusV1_08.2265.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 21,861.41 Da | 26.88 | 80.41 | -0.49 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G36050.2 | Endoplasmic reticulum vesicle transporter protein. | 0 |
| RefSeq | XP_020250815.1 | endoplasmic reticulum-Golgi intermediate compartment protein 3-like isoform X1 [Asparagus officinalis] | 0 |
| F1Q575 | ATP-dependent (S)-NAD(P)H-hydrate dehydratase OS=Danio rerio OX=7955 GN=naxd PE=3 SV=1 | 0 | |
| TrEMBL | A0A5P1ET11 | COPIIcoated_ERV domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F19420 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | COCNU_01G016110 |
| Asparagaceae | Asparagus officinalis | 6 | AsparagusV1_05.1942.V1.1, AsparagusV1_05.680.V1.1 ... |
| Brassicaceae | Brassica nigra | 1 | BniB01g044620.2N |
| Poaceae | Sporobolus alterniflorus | 1 | Chr20G008700 |