Basic Information
Locus ID:
AsparagusV1_08.2236.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 85218455 | 85221006 | + | AsparagusV1_08.2236.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.92 | 33,827.98 Da | 48.62 | 87.18 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 24 | 267 | 4.3E-58 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 21 | 267 | 5.49E-59 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 15 | 305 | 6.2E-77 | IPR036589 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 11 | 309 | 30.962952 | IPR003726 |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_020243239.1 | homocysteine S-methyltransferase 2-like [Asparagus officinalis] | 0 |
| Q9M1W4 | Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1F9C9 | Hcy-binding domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C03F5260 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology