Basic Information
Locus ID:
AsparagusV1_08.1670.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 50858345 | 50860573 | - | AsparagusV1_08.1670.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 21,566.44 Da | 45.62 | 101.76 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 129 | 192 | 1.5E-8 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 109 | 193 | 7.02E-19 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 93 | 196 | 6.4E-30 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 126 | 206 | 9.743286 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 132 | 154 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34500.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020242642.1 | probable receptor-like serine/threonine-protein kinase At4g34500, partial [Asparagus officinalis] | 0 |
| Q6NKZ9 | Probable receptor-like serine/threonine-protein kinase At4g34500 OS=Arabidopsis thaliana OX=3702 GN=At4g34500 PE=2 SV=1 | 0 | |
| TrEMBL | A0A834G7H8 | Protein kinase domain-containing protein OS=Rhododendron simsii OX=118357 GN=RHSIM_Rhsim11G0176700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 2 | Ag9G00052, Ag9G00097 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.1670.V1.1 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g29270 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG06.454 |