Basic Information
Locus ID:
AsparagusV1_08.1570.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 45770419 | 45783078 | - | AsparagusV1_08.1570.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 44,224.08 Da | 42.60 | 89.82 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 79 | 346 | 3.7136E-104 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 75 | 344 | 3.4E-44 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 55 | 344 | 1.5E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 40 | 148 | 3.0E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 149 | 363 | 4.3E-62 | - |
| SMART | SM00220 | serkin_6 | 73 | 344 | 3.7E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 73 | 352 | 36.244537 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 195 | 207 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 79 | 101 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52540.2 | - | 0 |
| RefSeq | XP_020244471.1 | PTI1-like tyrosine-protein kinase At3g15890 [Asparagus officinalis] | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9RJI8 | PTI1-like tyrosine-protein kinase At3g15890 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105049437 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology