Basic Information
Locus ID:
AsparagusV1_08.1285.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 29954453 | 29966219 | + | AsparagusV1_08.1285.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.41 | 31,146.58 Da | 29.73 | 89.96 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14132 | STKc_CK2_alpha | 15 | 243 | 8.46384E-159 | - |
| Pfam | PF00069 | Protein kinase domain | 34 | 243 | 4.8E-55 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 243 | 2.16E-64 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 34 | 110 | 8.0E-89 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 111 | 244 | 8.0E-89 | - |
| SMART | SM00220 | serkin_6 | 34 | 263 | 1.9E-49 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 34 | 263 | 37.530731 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 147 | 159 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 40 | 63 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko03008 (Ribosome biogenesis in eukaryotes)
map03008 (Ribosome biogenesis in eukaryotes)
map04064 (NF-kappa B signaling pathway)
ko04137 (Mitophagy - animal)
map04137 (Mitophagy - animal)
ko04139 (Mitophagy - yeast)
map04139 (Mitophagy - yeast)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04520 (Adherens junction)
map04520 (Adherens junction)
ko04712 (Circadian rhythm - plant)
map04712 (Circadian rhythm - plant)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23080.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_020277380.1 | casein kinase II subunit alpha-2 [Asparagus officinalis] | 0 |
| P28523 | Casein kinase II subunit alpha OS=Zea mays OX=4577 GN=ACK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A314XLQ6 | Casein kinase II subunit alpha-2 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_40306 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology