halophFGD

Basic Information

Locus ID: AsparagusV1_08.1060.V1.1

Species & Taxonomic ID: Asparagus officinalis & 4686

Genome Assembly: GCA_001876935.1

Description: Polyamine oxidase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr8	21581632	21590316	+	AsparagusV1_08.1060.V1.1

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.04	43,437.88 Da	41.45	79.50	-0.28

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF01593	Flavin containing amine oxidoreductase	143	365	2.1E-54	IPR002937
SUPERFAMILY	SSF54373	FAD-linked reductases, C-terminal domain	207	315	5.76E-29	-
SUPERFAMILY	SSF51905	FAD/NAD(P)-binding domain	102	369	1.94E-30	IPR036188
Gene3D	G3DSA:3.50.50.60	-	313	383	1.0E-18	IPR036188
Gene3D	G3DSA:3.90.660.10	-	146	312	6.4E-28	-
Gene3D	G3DSA:3.90.660.10	-	78	137	2.0E-9	-

Gene Ontology

Molecular Function:

GO:0016491 (oxidoreductase activity)

KEGG Pathway

KO Term:

K13366 (polyamine oxidase [EC:1.5.3.14 1.5.3.16 1.5.3.-])

Pathway:

ko00330 (Arginine and proline metabolism) map00330 (Arginine and proline metabolism) ko00410 (beta-Alanine metabolism) map00410 (beta-Alanine metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways)

Reaction:

R01914 (Spermidine + Oxygen + H2O <=> 1,3-Diaminopropane + 4-Aminobutyraldehyde + Hydrogen peroxide) R09076 (Spermine + Oxygen + H2O <=> Spermidine + 3-Aminopropanal + Hydrogen peroxide)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G13700.1	polyamine oxidase 1. Encodes a protein with polyamine oxidase activity. The mRNA of this gene is only expressed in very low amounts in the organs where it was detected (light-grown plants).
RefSeq	XP_020242776.1	LOW QUALITY PROTEIN: polyamine oxidase-like [Asparagus officinalis]
Swiss-Prot	O64411	Polyamine oxidase 1 OS=Zea mays OX=4577 GN=MPAO1 PE=1 SV=1
TrEMBL	A0A804JKS6	(wild Malaysian banana) hypothetical protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=GSMUA_172860.1 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg130, jg1597, jg29019
Aizoaceae	Mesembryanthemum crystallinum	7	gene_13664, gene_13665, gene_13666, gene_13667, gene_13668 ... gene_13669, gene_16411
Amaranthaceae	Atriplex hortensis	3	Ah000626, Ah000627, Ah035698
Amaranthaceae	Beta vulgaris	2	BVRB_2g029100, BVRB_7g169320
Amaranthaceae	Salicornia bigelovii	7	Sbi_jg19617, Sbi_jg19618, Sbi_jg21743, Sbi_jg22078 ... Sbi_jg30513, Sbi_jg58732, Sbi_jg58733
Amaranthaceae	Salicornia europaea	3	Seu_jg16001, Seu_jg28601, Seu_jg28602
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00008621, GOSA_00014958
Amaranthaceae	Suaeda glauca	9	Sgl03316, Sgl03620, Sgl08388, Sgl08740, Sgl25134, Sgl30327 ... Sgl30330, Sgl63021, Sgl67648
Amaranthaceae	Chenopodium album	9	gene:ENSEOMG00000005689, gene:ENSEOMG00000017063 ... gene:ENSEOMG00000019200, gene:ENSEOMG00000022927, gene:ENSEOMG00000022984, gene:ENSEOMG00000024720, gene:ENSEOMG00000024784, gene:ENSEOMG00000025088, gene:ENSEOMG00000049685
Amaranthaceae	Chenopodium quinoa	7	CQ.Regalona.r1.2AG0017140, CQ.Regalona.r1.2BG0018910 ... CQ.Regalona.r1.5AG0022870, CQ.Regalona.r1.5AG0022880, CQ.Regalona.r1.5AG0022890, CQ.Regalona.r1.5BG0024290, CQ.Regalona.r1.5BG0024300
Anacardiaceae	Pistacia vera	1	pistato.v30230040
Apiaceae	Apium graveolens	1	Ag1G00270
Arecaceae	Cocos nucifera	1	COCNU_05G004220
Arecaceae	Phoenix dactylifera	2	gene-LOC103713355, gene-LOC120108588
Asparagaceae	Asparagus officinalis	1	AsparagusV1_08.1060.V1.1
Asteraceae	Flaveria trinervia	3	Ftri11G22388, Ftri12G07201, FtriNA16082
Brassicaceae	Arabidopsis thaliana	1	AT5G13700.1
Brassicaceae	Eutrema salsugineum	1	Thhalv10015601m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp6g30320.v2.2
Brassicaceae	Brassica nigra	1	BniB08g006460.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq05G0776
Casuarinaceae	Casuarina glauca	1	Cgl05G0784
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate02g38470, gene.Thate02g38480
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-2657
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG03.82
Plumbaginaceae	Limonium bicolor	5	Lb1G07774, Lb2G13332, Lb2G14041, Lb4G23621, Lb8G36436
Poaceae	Echinochloa crus-galli	8	AH01.4671, AH02.4470, BH01.2715, BH01.2717, BH02.4520 ... CH01.2894, CH02.4570, Contig181.94
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_3AG0237150, gene-QOZ80_3AG0237160 ... gene-QOZ80_3BG0290920, gene-QOZ80_3BG0290930, gene-QOZ80_3BG0290960
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.4HG0400080.1, HORVU.MOREX.r3.6HG0588230.1 ... HORVU.MOREX.r3.7HG0720280.1, HORVU.MOREX.r3.7HG0747940.1, HORVU.MOREX.r3.7HG0747970.1
Poaceae	Lolium multiflorum	8	gene-QYE76_018064, gene-QYE76_031821, gene-QYE76_035017 ... gene-QYE76_035018, gene-QYE76_039109, gene-QYE76_039111, gene-QYE76_039118, gene-QYE76_070176
Poaceae	Oryza coarctata	2	Oco05G005230, Oco20G003030
Poaceae	Oryza sativa	3	LOC_Os03g09810.1, LOC_Os09g20260.1, LOC_Os09g20284.1
Poaceae	Paspalum vaginatum	2	gene-BS78_01G243300, gene-BS78_01G449800
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0101502, Pt_Chr0202686, Pt_Chr0404446
Poaceae	Sporobolus alterniflorus	5	Chr01G026260, Chr01G026270, Chr12G013140, Chr13G017100 ... Chr13G017110
Poaceae	Thinopyrum elongatum	6	Tel4E01G448600, Tel4E01G622900, Tel4E01G623000 ... Tel7E01G643100, Tel7E01G939400, Tel7E01G939500
Poaceae	Triticum dicoccoides	9	gene_TRIDC4AG005420, gene_TRIDC4BG046130 ... gene_TRIDC4BG062740, gene_TRIDC5AG077610, gene_TRIDC6AG057920, gene_TRIDC7AG052900, gene_TRIDC7AG075070, gene_TRIDC7BG045450, gene_TRIDC7BG071730
Poaceae	Triticum aestivum	11	TraesCS4A02G039600.1, TraesCS4B02G265900.1 ... TraesCS4B02G385300.1, TraesCS4D02G265800.1, TraesCS5A02G549600.1, TraesCS7A02G378800.1, TraesCS7A02G539200.1, TraesCS7B02G280700.1, TraesCS7B02G461800.1, TraesCS7D02G375700.1, TraesCS7D02G524900.1
Poaceae	Zea mays	3	Zm00001eb008280_P001, Zm00001eb008300_P001 ... Zm00001eb413630_P001
Poaceae	Zoysia japonica	6	nbis-gene-27518, nbis-gene-27522, nbis-gene-27523 ... nbis-gene-4212, nbis-gene-4213, nbis-gene-56215
Poaceae	Zoysia macrostachya	2	Zma_g15938, Zma_g4239
Portulacaceae	Portulaca oleracea	3	evm.TU.LG02.113, evm.TU.LG02.926, evm.TU.LG09.1044
Posidoniaceae	Posidonia oceanica	3	gene.Posoc03g06180, gene.Posoc03g06190, gene.Posoc03g06200
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_11_RagTag.1009, evm.TU.Scaffold_4_RagTag.480 ... evm.TU.Scaffold_7_RagTag.309, evm.TU.Scaffold_8_RagTag.1424
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-19415, nbisL1-mrna-28881, nbisL1-mrna-9244
Rhizophoraceae	Ceriops tagal	5	nbisL1-mrna-10250, nbisL1-mrna-13779, nbisL1-mrna-515 ... nbisL1-mrna-567, nbisL1-mrna-9115
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-15242, nbisL1-mrna-1852, nbisL1-mrna-6986
Rhizophoraceae	Kandelia candel	5	add.evm.TU.utg000010l.38, add.evm.TU.utg000010l.39 ... evm.TU.utg000008l.310, evm.TU.utg000018l.172, evm.TU.utg000028l.191
Rhizophoraceae	Kandelia obovata	3	Maker00000165, Maker00002823, Maker00010686
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-14596, nbisL1-mrna-755, nbisL1-mrna-8844 ... nbisL1-mrna-9511
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-1470, nbisL1-mrna-18790, nbisL1-mrna-20171 ... nbisL1-mrna-8645, nbisL1-mrna-8646
Salicaceae	Populus euphratica	4	populus_peu01889, populus_peu28622, populus_peu30080 ... populus_peu35924
Solanaceae	Lycium barbarum	1	gene-LOC132644760
Solanaceae	Solanum chilense	1	SOLCI002047700
Solanaceae	Solanum pennellii	1	gene-LOC107009669
Tamaricaceae	Reaumuria soongarica	2	gene_11741, gene_15977
Tamaricaceae	Tamarix chinensis	1	TC05G1302