Basic Information
Locus ID:
AsparagusV1_07.973.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 27719960 | 27721204 | + | AsparagusV1_07.973.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 8,743.60 Da | 68.63 | 33.42 | -1.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05495 | CHY zinc finger | 32 | 74 | 8.7E-10 | IPR008913 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 28 | 69 | 9.29E-12 | IPR037274 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 25 | 76 | 17.778299 | IPR008913 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18650.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_020275195.1 | zinc finger protein BRUTUS-like At1g18910 [Asparagus officinalis] | 0 |
| Q10LI1 | E3 ubiquitin-protein ligase SRFP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SRFP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EB05 | CHY-type domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F9730 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology