Basic Information
Locus ID:
AsparagusV1_07.773.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 20690478 | 20740088 | - | AsparagusV1_07.773.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 105,338.40 Da | 34.88 | 99.09 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 627 | 895 | 2.15154E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 625 | 833 | 1.3E-44 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 65 | 3.7E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 244 | 301 | 1.5E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 63 | 397 | 1.67E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 596 | 892 | 4.24E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 286 | 7.5E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 430 | 7.9E-14 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 592 | 696 | 3.4E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 184 | 2.1E-41 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 697 | 917 | 3.1E-56 | - |
| SMART | SM00220 | serkin_6 | 621 | 896 | 1.8E-32 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 268 | 290 | 7.273015 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 621 | 896 | 37.036041 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 627 | 649 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 741 | 753 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 927 | 950 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020276101.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Asparagus officinalis] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EA64 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F7730 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology