Basic Information
Locus ID:
AsparagusV1_07.741.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 19726714 | 19756185 | + | AsparagusV1_07.741.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 129,293.81 Da | 36.85 | 91.60 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 623 | 888 | 1.43335E-94 | - |
| CDD | cd01433 | Ribosomal_L16_L10e | 991 | 1116 | 8.08545E-46 | IPR016180 |
| Pfam | PF00252 | Ribosomal protein L16p/L10e | 962 | 1116 | 3.3E-35 | IPR016180 |
| Pfam | PF13855 | Leucine rich repeat | 152 | 211 | 5.5E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 271 | 330 | 1.0E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 619 | 883 | 4.8E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 69 | 2.6E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 603 | 896 | 9.57E-79 | IPR011009 |
| SUPERFAMILY | SSF54686 | Ribosomal protein L16p/L10e | 955 | 1123 | 2.35E-73 | IPR036920 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 396 | 2.04E-53 | - |
| Gene3D | G3DSA:3.90.1170.10 | Ribosomal protein L10e/L16 | 954 | 1167 | 1.4E-111 | IPR036920 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 290 | 1.4E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 693 | 910 | 9.6E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 588 | 692 | 6.7E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 185 | 7.5E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 419 | 2.8E-11 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 317 | 341 | 4.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 222 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 150 | 120.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 617 | 888 | 5.4E-39 | IPR000719 |
| TIGRFAM | TIGR00279 | uL16_euk_arch: ribosomal protein uL16 | 955 | 1124 | 7.7E-75 | IPR001197 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 617 | 890 | 37.785141 | IPR000719 |
| ProSitePatterns | PS01257 | Ribosomal protein L10e signature. | 1058 | 1079 | - | IPR018255 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 736 | 748 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 623 | 645 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020273382.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Asparagus officinalis] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5P1EDD3 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F7410 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology