Basic Information
Locus ID:
AsparagusV1_07.577.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 14962800 | 14967124 | - | AsparagusV1_07.577.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 74,322.55 Da | 58.62 | 95.31 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 399 | 643 | 1.2E-21 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 62 | 3.0E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 21 | 168 | 4.59E-26 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 370 | 643 | 1.3E-36 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 471 | 652 | 1.9E-28 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 362 | 469 | 3.4E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 190 | 6.2E-38 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 387 | 646 | 17.149502 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 313 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_020274380.1 | protein MALE DISCOVERER 1-like [Asparagus officinalis] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1E9S0 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F5770 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology