Basic Information
Locus ID:
AsparagusV1_07.3874.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 149474282 | 149477357 | - | AsparagusV1_07.3874.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 53,597.86 Da | 31.06 | 88.91 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 366 | 436 | 3.6E-16 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 25 | 346 | 2.8E-75 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 25 | 346 | 1.33E-77 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 362 | 453 | 3.0E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 24 | 353 | 7.8E-110 | - |
| SMART | SM00768 | X8_cls | 365 | 450 | 5.0E-39 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_020274124.1 | glucan endo-1,3-beta-glucosidase 4 isoform X1 [Asparagus officinalis] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1ELD6 | X8 domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F38740 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology