Basic Information
Locus ID:
AsparagusV1_07.3676.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 145904755 | 145914153 | + | AsparagusV1_07.3676.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 75,193.34 Da | 38.60 | 87.08 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 390 | 660 | 1.26084E-87 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 386 | 657 | 2.6E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 68 | 3.3E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 118 | 178 | 6.4E-10 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 216 | 1.13E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 367 | 657 | 1.11E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 463 | 681 | 2.3E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 346 | 461 | 8.7E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 240 | 1.1E-39 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 167 | 189 | 7.088198 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 384 | 660 | 35.212753 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 671 | 692 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 673 | 692 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 259 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_020274768.1 | protein STRUBBELIG-RECEPTOR FAMILY 6-like isoform X1 [Asparagus officinalis] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EHJ8 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F36760 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology