Basic Information
Locus ID:
AsparagusV1_07.3619.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Casein Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 144867058 | 144882533 | - | AsparagusV1_07.3619.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 115,939.07 Da | 43.49 | 74.18 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 752 | 1027 | 1.5299E-82 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 750 | 1024 | 1.5E-44 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 192 | 330 | 1.1E-9 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 725 | 1024 | 1.64E-69 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 130 | 372 | 2.19E-45 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 102 | 370 | 7.7E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 719 | 822 | 3.1E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 824 | 1035 | 8.8E-57 | - |
| SMART | SM00220 | serkin_6 | 746 | 1028 | 2.8E-16 | IPR000719 |
| SMART | SM00219 | tyrkin_6 | 746 | 1024 | 1.1E-26 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 61 | 373 | 14.577114 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 746 | 1028 | 34.873539 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 136 | 168 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 752 | 775 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 214 | 226 | - | IPR008271 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 874 | 886 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 694 | 724 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 706 | 720 | - | - |
| Coils | Coil | Coil | 74 | 95 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13670.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_020273465.1 | casein kinase 1-like protein HD16 [Asparagus officinalis] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EHE4 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F36190 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology