Basic Information
Locus ID:
AsparagusV1_07.3597.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 144546789 | 144550606 | - | AsparagusV1_07.3597.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.24 | 71,542.71 Da | 36.14 | 91.10 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 376 | 612 | 4.74969E-90 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 106 | 140 | 1.0E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 31 | 71 | 5.3E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 373 | 599 | 6.7E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 349 | 608 | 8.81E-76 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 8 | 212 | 4.39E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 103 | 228 | 5.0E-31 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 448 | 637 | 2.3E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 332 | 447 | 1.1E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 101 | 1.5E-20 | IPR032675 |
| SMART | SM00220 | serkin_6 | 370 | 623 | 1.3E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 370 | 665 | 38.802788 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 495 | 507 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 376 | 398 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 256 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 256 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_020272462.1 | LOW QUALITY PROTEIN: receptor protein kinase TMK1-like [Asparagus officinalis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1EHF1 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F35970 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology