Basic Information
Locus ID:
AsparagusV1_07.3383.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Belongs to the heat shock protein 70 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 139019766 | 139044020 | - | AsparagusV1_07.3383.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.70 | 39,265.79 Da | 33.65 | 99.89 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00012 | Hsp70 protein | 305 | 346 | 5.2E-16 | IPR013126 |
| Pfam | PF00012 | Hsp70 protein | 253 | 303 | 7.5E-11 | IPR013126 |
| SUPERFAMILY | SSF53067 | Actin-like ATPase domain | 308 | 346 | 4.66E-11 | IPR043129 |
| SUPERFAMILY | SSF53067 | Actin-like ATPase domain | 259 | 303 | 2.49E-6 | IPR043129 |
| Gene3D | G3DSA:3.30.420.40 | - | 306 | 367 | 2.2E-18 | - |
| Gene3D | G3DSA:3.30.420.40 | - | 226 | 305 | 3.2E-12 | - |
| ProSitePatterns | PS00329 | Heat shock hsp70 proteins family signature 2. | 314 | 327 | - | IPR018181 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42020.2 | Heat shock protein 70 (Hsp 70) family protein. Luminal binding protein (BiP2) involved in polar nuclei fusion during proliferation of endosperm nuclei. | 0 |
| RefSeq | XP_020273850.1 | luminal-binding protein 2 [Asparagus officinalis] | 0 |
| Q03685 | Luminal-binding protein 5 OS=Nicotiana tabacum OX=4097 GN=BIP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1EGT8 | Heat shock protein 70 family OS=Asparagus officinalis OX=4686 GN=A4U43_C07F33830 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | COCNU_01G016110 |
| Asparagaceae | Asparagus officinalis | 6 | AsparagusV1_05.1942.V1.1, AsparagusV1_05.680.V1.1 ... |
| Brassicaceae | Brassica nigra | 1 | BniB01g044620.2N |
| Poaceae | Sporobolus alterniflorus | 1 | Chr20G008700 |