Basic Information
Locus ID:
AsparagusV1_07.3343.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 137992907 | 137993795 | + | AsparagusV1_07.3343.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.38 | 19,350.60 Da | 32.70 | 82.58 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 24 | 125 | 1.4334E-45 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 34 | 119 | 3.6E-22 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 23 | 126 | 3.41E-31 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 22 | 130 | 7.6E-33 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 24 | 127 | 37.043236 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17675.1 | Cupredoxin superfamily protein. Encodes a Plantacyanin/Basic blue family protein | 0 |
| RefSeq | XP_020272672.1 | mavicyanin-like [Asparagus officinalis] | 0 |
| G7L0H3 | Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5P1EH79 | Phytocyanin domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F33430 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology