Basic Information
Locus ID:
AsparagusV1_07.3135.V1.1
Species & Taxonomic ID:
Asparagus officinalis & 4686
Genome Assembly:
GCA_001876935.1
Short Name:
CDKE-1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 131566161 | 131577262 | + | AsparagusV1_07.3135.V1.1 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 14,914.02 Da | 31.79 | 111.59 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 60 | 123 | 2.7E-19 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 59 | 124 | 1.32E-22 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 45 | 130 | 3.8E-23 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 132 | 18.661839 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 88 | 100 | - | IPR008271 |
| Coils | Coil | Coil | 31 | 58 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63610.1 | cyclin-dependent kinase E;1. significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain. | 0 |
| RefSeq | XP_020275451.1 | cyclin-dependent kinase E-1-like [Asparagus officinalis] | 0 |
| Q336M2 | Cyclin-dependent kinase E-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKE-1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5P1EI89 | Protein kinase domain-containing protein OS=Asparagus officinalis OX=4686 GN=A4U43_C07F31350 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology